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SRX5021553: RNA-seq of liverworts
1 ILLUMINA (Illumina HiSeq 2000) run: 22.4M spots, 6.2G bases, 2.1Gb downloads

Design: LncRNA
Submitted by: Fairylake Botanical Garden
Study: 42 liverwort transcriptome sequencing
show Abstracthide Abstract
For a conprehensive profiling of RNA editing sites in liverworts, we sequenced 42 lierwort transcriptome covering 13 liverwort orders, including Lepidozia sandvicensis Lindenb.,Lepidozia trichodes (Reinw. ex Blume et Nees) Gottsche,Bazzania japonica (Sande Lac.) Lindb.,Herbertus dicranus (Taylor) Trevis., Herbertus ramosus (Steph.) H. A. Mill.,Heteroscyphus zollingeri (Gottsche)Schiffn.Plagiochila subtropica Steph.,Trichocolea tomentella (Ehrh.) Dumort.,Scapania griffithii Schiffn.,Scapania ornithopodioides (With.) Waddel,Plicanthus hirtellus (F. Weber) R. M. Schust.,Odontoschisma grosseverrucosum Steph.,Nowellia curvifolia (Dicks.) Mitt.,Metacalypogeia alternifolia (Nees) Grolle,Mylia nuda Inoue et B. Y. Yang,Frullania orientalis Sande Lac.,Ptychanthus striatus (Lehm. & Lindenb.) Nees,Porella plumosa (Mitt.) Inoue,Radula japonica Gottsche ex Steph.,Ptilidium pulcherrimum (Weber) Vain.,Aneura pinguis (L.) Dumort. I,Aneura pinguis (L.) Dumort. II,Riccardia latifrons (Lindb.) Lindb.,Metzgeria leptoneura Spruce,Pleurozia purpurea Lindb.,Fossombronia cristula Austin,Makinoa crispata (Steph.) Miyake,Pallavicinia lyellii (Hook.) Carruth I,Pallavicinia lyellii (Hook.) Carruth II,Pellia endiviifolia (Dicks.) Dum.,Monosolenium tenerum Griff. I,Monosolenium tenerum Griff. II,Wiesnerella denudata (Mitt.) Steph.,Riccia cavernosa Hoffm.,Asterella wallichiana (Lehm. Lindenb.) Grolle,Dumortiera hirsuta Sw. (Nees),Conocephalum conicum (L.) Dumort.,Lunularia cruciata (L.) Dum.,Blasia pusilla L.,Haplomitrium mnioides (Lindb.) Schust. I,Haplomitrium mnioides (Lindb.) Schust. II,Treubia lacunosa (Col.) Prosk.
Sample: 6055
SAMN10434257 • SRS4054186 • All experiments • All runs
Library:
Name: 6055
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 22.4M spots, 6.2G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR820221222,444,9516.2G2.1Gb2019-12-12

ID:
6775025

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